#NEXUS
[Created Tue Jun 20 10:15:38 2000 by SEQUENCE MONKEY ver. 2.8.0]
[SEQUENCE MONKEY concocted by Dan Graf, Ann Arbor, Michigan]

[Dataset from: Graf & î Foighil (2000). Molecular phylogenetic analysis of 28S ]
[              rDNA supports a Gondwanan origin for Australasian Hyriidae      ]
[              (Mollusca: Bivalvia/ Unionoida). Vie Milieu 50: 245-254.        ]

BEGIN DATA;
DIMENSIONS  NTAX=7  NCHAR=638;
FORMAT  DATATYPE=DNA  MISSING=?  GAP=-  MATCHCHAR=.  INTERLEAVE;
OPTIONS GAP=MISSING;
MATRIX

[               1........|.........|.........|.........|.........|.........|  ]

H_australis     tgtttgctttgtggtctgggatgattggacttgctttaaggttattaattcgggctgaat
H_depressa_1    .a.....................g....g.....g........g..g...........g.
H_depressa_2    ??.a...................g....g.....g........g..g...........g.
H_menziesi_1    .c.....c....................g........g.....g..g...........g.
H_menziesi_2    .c.....c....................g........g...c.g..g...........g.
V_ambigua_1     ??.ag.....a...........a.................a...........a..g..gc
V_ambigua_2     ....g.....a........t..a.................a...........a..g...c

[               61.......|.........|.........|.........|.........|.........|  ]

H_australis     tggggcagcctgggaggcttttgggggatgaccagctatataatgtaattgtaacggctc
H_depressa_1    ....t...........a...c.c..t.....t...t.g..............t.......
H_depressa_2    ....t...........a...c.c..t.....t...t.g..............t.......
H_menziesi_1    ................at.a.....t.........t..........t...........g.
H_menziesi_2    ................at.a.....t.........t..........t...........g.
V_ambigua_1     .t..a..a.........t.g.....t.....t...t..........g...........a.
V_ambigua_2     .t..a..a.........t.g.....t..c..t...t..........g...........a.

[               121......|.........|.........|.........|.........|.........|  ]

H_australis     atgcttttatgatgattttttttttggtaatgcctatgataatcggcggatttgggaatt
H_depressa_1    ........g.t..a.....c.......................t..g..g..........
H_depressa_2    ........g.t..a.....c.......................t..g..g..........
H_menziesi_1    ....c.....a.................g........a..g..t..t..t........c.
H_menziesi_2    ..........a.................g........a..g..t..t..t........c.
V_ambigua_1     ...................c...c.a..g..a........g..t..g..g.....t....
V_ambigua_2     ...................c...c.a..g..a........g..t..g..g.....t....

[               181......|.........|.........|.........|.........|.........|  ]

H_australis     ggttaattcctttaatgttgggggctcccgatatagcttttccgcgtttaaataatttaa
H_depressa_1    ....g..c.....g.....a........t.................g.........c.t.
H_depressa_2    ....g..c.....g.....a........t.................g.........c.t.
H_menziesi_1    ....g........g..............t.....g........t..a...........g.
H_menziesi_2    ....g........g..............t.....g........t..a...........g.
V_ambigua_1     .a..g.......................t.....g.........................
V_ambigua_2     .a..g.......................t.....g.........................

[               241......|.........|.........|.........|.........|.........|  ]

H_australis     ggttttggttacttgttccggcattgtttttattactcaggtcttctttagttgagagtg
H_depressa_1    .......a..............g...........gt.a..t........g..g.......
H_depressa_2    .......a..............g...........gt.a..t........g..g.......
H_menziesi_1    .t......c.......g..t...........g..gt.a.....g.....g........g.
H_menziesi_2    .t......c.c.....g..t..g........g..g..a.....g.....g........g.
V_ambigua_1     ..........gt.g.....t..............gt.a.....c.....g..........
V_ambigua_2     ..........gt.g.....t...........g..gt.a...........g..........

[               301......|.........|.........|.........|.........|.........|  ]

H_australis     gtgttgggactgggtgaactgtttatcccccgttatctggaaatatcgctcattctgggg
H_depressa_1    .......a........g...........g..t..g.....g...g.t..a..........
H_depressa_2    .......a........g...........g..t..g.....g...g.t..a..c.......
H_menziesi_1    ................g..............c..g.....g...g.t...........t.
H_menziesi_2    ................g..............a..g.....g...g.t...........t.
V_ambigua_1     .............t..g........c..a..t........g...g.t..a........t.
V_ambigua_2     .............t..g........c..a..t........g...g.t..a........t.

[               361......|.........|.........|.........|.........|.........|  ]

H_australis     cttcggttgatttggcgattttttctttgcatcttgctggtgcttcttctattcttgggg
H_depressa_1    ................t................................a..........
H_depressa_2    ................t................................a..........
H_menziesi_1    .g..t..a........t................................?..........
H_menziesi_2    .g..t..c........t....................c......................
V_ambigua_1     ................t.....c...c.t...............................
V_ambigua_2     ................t.........c.t...............................

[               421......|.........|.........|.........|.........|.........|  ]

H_australis     ccattaattttatttctactgtggggaatatacgatctgttgggttagtagctgagcgaa
H_depressa_1    .g....................t..c.....g..t.........c....t.....a..t.
H_depressa_2    .g....................t..c.....g..t.........c....t.....a..t.
H_menziesi_1    .t....................t..a.....g..g...........g..c........g.
H_menziesi_2    .t....................t..a..c..g..g...........g..c........g.
V_ambigua_1     .t.....c...........c..t........g..g..g...........g........t.
V_ambigua_2     .t.....c...........c..t...........g..g...........g........t.

[               481......|.........|.........|.........|.........|.........|  ]

H_australis     ttccattgtttgtgtgggctgtgacggtgacagcagtactattagttgcttctttgcctg
H_depressa_1    ....t........a........t.....a.....ta.tt.g..g...........a....
H_depressa_2    ....t........a........t.....a.....ta.tt.g..g...........a....
H_menziesi_1    ....t............ag...t....?a..g..ca.tt.g..g.....c..........
H_menziesi_2    ....t............ag...t.....a..g..ca.tt.g..g................
V_ambigua_1     ....t........a..a.....t...........t...t.g.....g.....g.....g.
V_ambigua_2     ....t........a..a.....t...........t...t.g.....g.....g.....g.

[               541......|.........|.........|.........|.........|.........|  ]

H_australis     tgttggctggggctattactatgcttttgactgaccgtaatctaaatacttcttttttcg
H_depressa_1    ....a.................a...........t......t................t.
H_depressa_2    ....a.................a...........t......t................t.
H_menziesi_1    ...................g...t.g........t......a.c...........c..t.
H_menziesi_2    ...................g...t.g...............a.c..c........c..t.
V_ambigua_1     .......g...........g...t.a..a.....t......t.g.....g..........
V_ambigua_2     .......g...........g...t.a..a.....t......t.g.....g..........

[               601......|.........|.........|........  ]

H_australis     atcctactggtgggggtgatcctattttgtatatgcat
H_depressa_1    .......a.....a..g.....a.....a.........
H_depressa_2    .......a.....a..g.....a.....a.........
H_menziesi_1    .............t..a..c......c...........
H_menziesi_2    .............t..g..c..................
V_ambigua_1     ..........c..t..............a.....a...
V_ambigua_2     ..........c..t..............a....?????
;
END;

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